IL_4V4G_086
3D structure
- PDB id
- 4V4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 11.5 Å
Loop
- Sequence
- GGUUAAGGAUGUG*UGCGCCGAAAAUGAUCGGGGC
- Length
- 34 nucleotides
- Bulged bases
- 4V4G|1|BB|G|1036, 4V4G|1|BB|A|1039, 4V4G|1|BB|U|1044, 4V4G|1|BB|A|1138, 4V4G|1|BB|U|1141, 4V4G|1|BB|G|1142, 4V4G|1|BB|A|1143, 4V4G|1|BB|U|1144
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V4G|1|BB|G|1035
4V4G|1|BB|G|1036
4V4G|1|BB|U|1037
4V4G|1|BB|U|1038
4V4G|1|BB|A|1039
4V4G|1|BB|A|1040
4V4G|1|BB|G|1041
4V4G|1|BB|G|1042
4V4G|1|BB|A|1043
4V4G|1|BB|U|1044
4V4G|1|BB|G|1045
4V4G|1|BB|U|1046
4V4G|1|BB|G|1047
*
4V4G|1|BB|U|1130
4V4G|1|BB|G|1131
4V4G|1|BB|C|1132
4V4G|1|BB|G|1133
4V4G|1|BB|C|1134
4V4G|1|BB|C|1135
4V4G|1|BB|G|1136
4V4G|1|BB|A|1137
4V4G|1|BB|A|1138
4V4G|1|BB|A|1139
4V4G|1|BB|A|1140
4V4G|1|BB|U|1141
4V4G|1|BB|G|1142
4V4G|1|BB|A|1143
4V4G|1|BB|U|1144
4V4G|1|BB|C|1145
4V4G|1|BB|G|1146
4V4G|1|BB|G|1147
4V4G|1|BB|G|1148
4V4G|1|BB|G|1149
4V4G|1|BB|C|1150
Current chains
- Chain BB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain B6
- 50S ribosomal protein L36
- Chain BA
- 5S ribosomal RNA; 5S rRNA
- Chain BE
- 50S ribosomal protein L3
- Chain BH
- 50S ribosomal protein L6
- Chain BK
- 50S ribosomal protein L13
- Chain BN
- 50S ribosomal protein L16
- Chain BW
- general stress protein Ctc
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