IL_4V4G_149

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

UGAAAGACCAC*GUGGGGGAG

Length

20 nucleotides

Bulged bases

4V4G|1|CA|A|607, 4V4G|1|CA|G|610, 4V4G|1|CA|A|611, 4V4G|1|CA|G|630, 4V4G|1|CA|G|631

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|CA|U|605
4V4G|1|CA|G|606
4V4G|1|CA|A|607
4V4G|1|CA|A|608
4V4G|1|CA|A|609
4V4G|1|CA|G|610
4V4G|1|CA|A|611
4V4G|1|CA|C|612
4V4G|1|CA|C|613
4V4G|1|CA|A|614
4V4G|1|CA|C|615
*
4V4G|1|CA|G|625
4V4G|1|CA|U|626
4V4G|1|CA|G|627
4V4G|1|CA|G|628
4V4G|1|CA|G|629
4V4G|1|CA|G|630
4V4G|1|CA|G|631
4V4G|1|CA|A|632
4V4G|1|CA|G|633

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CD

30S ribosomal protein S4

Chain CH

30S ribosomal protein S8

Chain CP

30S ribosomal protein S16

Chain CQ

30S ribosomal protein S17