3D structure

PDB id
4V4G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
Experimental method
X-RAY DIFFRACTION
Resolution
11.5 Å

Loop

Sequence
GCGAG*UCCGU
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V4G|1|DB|G|961
4V4G|1|DB|C|962
4V4G|1|DB|G|963
4V4G|1|DB|A|964
4V4G|1|DB|G|965
*
4V4G|1|DB|U|974
4V4G|1|DB|C|975
4V4G|1|DB|C|976
4V4G|1|DB|G|977
4V4G|1|DB|U|978

Current chains

Chain DB
23S RIBOSOMAL RNA

Nearby chains

Chain DA
5S ribosomal RNA; 5S rRNA
Chain DN
50S ribosomal protein L16

Coloring options:

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