3D structure

PDB id
4V4G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
Experimental method
X-RAY DIFFRACTION
Resolution
11.5 Å

Loop

Sequence
CGUUCA*UGAAGUG
Length
13 nucleotides
Bulged bases
4V4G|1|DB|G|1261
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V4G|1|DB|C|1210
4V4G|1|DB|G|1211
4V4G|1|DB|U|1212
4V4G|1|DB|U|1213
4V4G|1|DB|C|1214
4V4G|1|DB|A|1215
*
4V4G|1|DB|U|1257
4V4G|1|DB|G|1258
4V4G|1|DB|A|1259
4V4G|1|DB|A|1260
4V4G|1|DB|G|1261
4V4G|1|DB|U|1262
4V4G|1|DB|G|1263

Current chains

Chain DB
23S RIBOSOMAL RNA

Nearby chains

Chain DF
50S ribosomal protein L4
Chain DM
50S ribosomal protein L15
Chain DR
50S ribosomal protein L20

Coloring options:

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