IL_4V4G_213

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

CGUUCA*UGAAGUG

Length

13 nucleotides

Bulged bases

4V4G|1|DB|G|1261

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|DB|C|1210
4V4G|1|DB|G|1211
4V4G|1|DB|U|1212
4V4G|1|DB|U|1213
4V4G|1|DB|C|1214
4V4G|1|DB|A|1215
*
4V4G|1|DB|U|1257
4V4G|1|DB|G|1258
4V4G|1|DB|A|1259
4V4G|1|DB|A|1260
4V4G|1|DB|G|1261
4V4G|1|DB|U|1262
4V4G|1|DB|G|1263

Current chains

Chain DB

23S RIBOSOMAL RNA

Nearby chains

Chain DF

50S ribosomal protein L4

Chain DM

50S ribosomal protein L15

Chain DR

50S ribosomal protein L20