IL_4V4G_332
3D structure
- PDB id
- 4V4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 11.5 Å
Loop
- Sequence
- GCUAAG*CGAAGC
- Length
- 12 nucleotides
- Bulged bases
- 4V4G|1|FB|A|1167
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4G_332 not in the Motif Atlas
- Geometric match to IL_4V9F_096
- Geometric discrepancy: 0.3397
- The information below is about IL_4V9F_096
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_91079.1
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
4V4G|1|FB|G|1008
4V4G|1|FB|C|1009
4V4G|1|FB|U|1010
4V4G|1|FB|A|1011
4V4G|1|FB|A|1012
4V4G|1|FB|G|1013
*
4V4G|1|FB|C|1164
4V4G|1|FB|G|1165
4V4G|1|FB|A|1166
4V4G|1|FB|A|1167
4V4G|1|FB|G|1168
4V4G|1|FB|C|1169
Current chains
- Chain FB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain FA
- 5S ribosomal RNA; 5S rRNA
- Chain FR
- 50S ribosomal protein L20
- Chain FS
- 50S ribosomal protein L21
- Chain FZ
- 50S ribosomal protein L30
Coloring options: