Loop IL_4V4G

3D structure

PDB id: 4V4G (explore in PDB, NAKB, or RNA 3D Hub)
Description: Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
Experimental method: X-RAY DIFFRACTION
Resolution: 11.5 Å

Loop

Sequence: GUGGAGUGAUGGAGGGACG*CCAAGAAAAGCUUCUAAACGUUGAAAC
Length: 46 nucleotides
Bulged bases: 4V4G|1|FB|G|1428, 4V4G|1|FB|A|1441, 4V4G|1|FB|C|1442, 4V4G|1|FB|A|1582, 4V4G|1|FB|A|1583, 4V4G|1|FB|U|1601, 4V4G|1|FB|G|1602
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

4V4G|1|FB|G|1425
4V4G|1|FB|U|1426
4V4G|1|FB|G|1427
4V4G|1|FB|G|1428
4V4G|1|FB|A|1429
4V4G|1|FB|G|1430
4V4G|1|FB|U|1431
4V4G|1|FB|G|1432
4V4G|1|FB|A|1433
4V4G|1|FB|U|1434
4V4G|1|FB|G|1435
4V4G|1|FB|G|1436
4V4G|1|FB|A|1437
4V4G|1|FB|G|1438
4V4G|1|FB|G|1439
4V4G|1|FB|G|1440
4V4G|1|FB|A|1441
4V4G|1|FB|C|1442
4V4G|1|FB|G|1443
*
4V4G|1|FB|C|1580
4V4G|1|FB|C|1581
4V4G|1|FB|A|1582
4V4G|1|FB|A|1583
4V4G|1|FB|G|1584
4V4G|1|FB|A|1585
4V4G|1|FB|A|1586
4V4G|1|FB|A|1587
4V4G|1|FB|A|1588
4V4G|1|FB|G|1589
4V4G|1|FB|C|1590
4V4G|1|FB|U|1591
4V4G|1|FB|U|1592
4V4G|1|FB|C|1593
4V4G|1|FB|U|1594
4V4G|1|FB|A|1595
4V4G|1|FB|A|1596
4V4G|1|FB|A|1597
4V4G|1|FB|C|1598
4V4G|1|FB|G|1599
4V4G|1|FB|U|1600
4V4G|1|FB|U|1601
4V4G|1|FB|G|1602
4V4G|1|FB|A|1603
4V4G|1|FB|A|1604
4V4G|1|FB|A|1605
4V4G|1|FB|C|1606

Current chains

Chain FB: 23S RIBOSOMAL RNA

Nearby chains

Chain FD: 50S ribosomal protein L2

IL_4V4G_343