IL_4V4G_375

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

GGUGGGAG*CGCCGGUGAAAUACCACC

Length

26 nucleotides

Bulged bases

4V4G|1|FB|G|3121, 4V4G|1|FB|U|3172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|FB|G|3120
4V4G|1|FB|G|3121
4V4G|1|FB|U|3122
4V4G|1|FB|G|3123
4V4G|1|FB|G|3124
4V4G|1|FB|G|3125
4V4G|1|FB|A|3126
4V4G|1|FB|G|3127
*
4V4G|1|FB|C|3161
4V4G|1|FB|G|3162
4V4G|1|FB|C|3163
4V4G|1|FB|C|3164
4V4G|1|FB|G|3165
4V4G|1|FB|G|3166
4V4G|1|FB|U|3167
4V4G|1|FB|G|3168
4V4G|1|FB|A|3169
4V4G|1|FB|A|3170
4V4G|1|FB|A|3171
4V4G|1|FB|U|3172
4V4G|1|FB|A|3173
4V4G|1|FB|C|3174
4V4G|1|FB|C|3175
4V4G|1|FB|A|3176
4V4G|1|FB|C|3177
4V4G|1|FB|C|3178

Current chains

Chain FB

23S RIBOSOMAL RNA

Nearby chains

Chain F7

50S ribosomal protein L1P