IL_4V4G_404

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

GGAGUAG*CGCAGAUACC

Length

17 nucleotides

Bulged bases

4V4G|1|GA|A|702

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|GA|G|682
4V4G|1|GA|G|683
4V4G|1|GA|A|684
4V4G|1|GA|G|685
4V4G|1|GA|U|686
4V4G|1|GA|A|687
4V4G|1|GA|G|688
*
4V4G|1|GA|C|699
4V4G|1|GA|G|700
4V4G|1|GA|C|701
4V4G|1|GA|A|702
4V4G|1|GA|G|703
4V4G|1|GA|A|704
4V4G|1|GA|U|705
4V4G|1|GA|A|706
4V4G|1|GA|C|707
4V4G|1|GA|C|708

Current chains

Chain GA

16S ribosomal RNA

Nearby chains

Chain GK

30S ribosomal protein S11

Chain HB

Large subunit ribosomal RNA; LSU rRNA