IL_4V4G_539

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

GGC*GUCAGC

Length

9 nucleotides

Bulged bases

4V4G|1|IA|C|1200, 4V4G|1|IA|A|1201

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|IA|G|1057
4V4G|1|IA|G|1058
4V4G|1|IA|C|1059
*
4V4G|1|IA|G|1198
4V4G|1|IA|U|1199
4V4G|1|IA|C|1200
4V4G|1|IA|A|1201
4V4G|1|IA|G|1202
4V4G|1|IA|C|1203

Current chains

Chain IA

16S ribosomal RNA

Nearby chains

Chain IC

30S ribosomal protein S3

Chain IJ

30S ribosomal protein S10

Chain IN

30S ribosomal protein S14

Chain Ia

protein Y