IL_4V4G_543

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

GAUGC*GCUAAUC

Length

12 nucleotides

Bulged bases

4V4G|1|IA|U|1257, 4V4G|1|IA|G|1258, 4V4G|1|IA|A|1279, 4V4G|1|IA|A|1280, 4V4G|1|IA|U|1281

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|IA|G|1255
4V4G|1|IA|A|1256
4V4G|1|IA|U|1257
4V4G|1|IA|G|1258
4V4G|1|IA|C|1259
*
4V4G|1|IA|G|1276
4V4G|1|IA|C|1277
4V4G|1|IA|U|1278
4V4G|1|IA|A|1279
4V4G|1|IA|A|1280
4V4G|1|IA|U|1281
4V4G|1|IA|C|1282

Current chains

Chain IA

16S ribosomal RNA

Nearby chains

Chain IC

30S ribosomal protein S3

Chain IJ

30S ribosomal protein S10

Chain IN

30S ribosomal protein S14