IL_4V4G_568
3D structure
- PDB id
- 4V4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 11.5 Å
Loop
- Sequence
- GAC*GC
- Length
- 5 nucleotides
- Bulged bases
- 4V4G|1|JB|A|601
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4G_568 not in the Motif Atlas
- Homologous match to IL_7A0S_012
- Geometric discrepancy: 0.4639
- The information below is about IL_7A0S_012
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 132
Unit IDs
4V4G|1|JB|G|600
4V4G|1|JB|A|601
4V4G|1|JB|C|602
*
4V4G|1|JB|G|678
4V4G|1|JB|C|679
Current chains
- Chain JB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain J5
- 50S ribosomal protein L35
- Chain JF
- 50S ribosomal protein L4
- Chain JM
- 50S ribosomal protein L15
Coloring options: