IL_4V4G_574

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

GAUGUUGACC*GCGUUUAGUC

Length

20 nucleotides

Bulged bases

4V4G|1|JB|G|858, 4V4G|1|JB|U|859, 4V4G|1|JB|U|943

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|JB|G|855
4V4G|1|JB|A|856
4V4G|1|JB|U|857
4V4G|1|JB|G|858
4V4G|1|JB|U|859
4V4G|1|JB|U|860
4V4G|1|JB|G|861
4V4G|1|JB|A|862
4V4G|1|JB|C|863
4V4G|1|JB|C|864
*
4V4G|1|JB|G|938
4V4G|1|JB|C|939
4V4G|1|JB|G|940
4V4G|1|JB|U|941
4V4G|1|JB|U|942
4V4G|1|JB|U|943
4V4G|1|JB|A|944
4V4G|1|JB|G|945
4V4G|1|JB|U|946
4V4G|1|JB|C|947

Current chains

Chain JB

23S RIBOSOMAL RNA

Nearby chains

Chain J5

50S ribosomal protein L35

Chain JZ

50S ribosomal protein L30