3D structure

PDB id
4V4G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
Experimental method
X-RAY DIFFRACTION
Resolution
11.5 Å

Loop

Sequence
CUCAGUG*CUCAAG
Length
13 nucleotides
Bulged bases
4V4G|1|JB|C|1031, 4V4G|1|JB|C|1152, 4V4G|1|JB|A|1153, 4V4G|1|JB|A|1154
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V4G|1|JB|C|1029
4V4G|1|JB|U|1030
4V4G|1|JB|C|1031
4V4G|1|JB|A|1032
4V4G|1|JB|G|1033
4V4G|1|JB|U|1034
4V4G|1|JB|G|1035
*
4V4G|1|JB|C|1150
4V4G|1|JB|U|1151
4V4G|1|JB|C|1152
4V4G|1|JB|A|1153
4V4G|1|JB|A|1154
4V4G|1|JB|G|1155

Current chains

Chain JB
23S RIBOSOMAL RNA

Nearby chains

Chain JK
50S ribosomal protein L13

Coloring options:

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