IL_4V4G_585

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

CUCAGUG*CUCAAG

Length

13 nucleotides

Bulged bases

4V4G|1|JB|C|1031, 4V4G|1|JB|C|1152, 4V4G|1|JB|A|1153, 4V4G|1|JB|A|1154

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|JB|C|1029
4V4G|1|JB|U|1030
4V4G|1|JB|C|1031
4V4G|1|JB|A|1032
4V4G|1|JB|G|1033
4V4G|1|JB|U|1034
4V4G|1|JB|G|1035
*
4V4G|1|JB|C|1150
4V4G|1|JB|U|1151
4V4G|1|JB|C|1152
4V4G|1|JB|A|1153
4V4G|1|JB|A|1154
4V4G|1|JB|G|1155

Current chains

Chain JB

23S RIBOSOMAL RNA

Nearby chains

Chain JK

50S ribosomal protein L13