IL_4V4G_623

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

GGCGUGCACG*UUCAGCGGAC

Length

20 nucleotides

Bulged bases

4V4G|1|JB|C|2824, 4V4G|1|JB|C|2842

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|JB|G|2818
4V4G|1|JB|G|2819
4V4G|1|JB|C|2820
4V4G|1|JB|G|2821
4V4G|1|JB|U|2822
4V4G|1|JB|G|2823
4V4G|1|JB|C|2824
4V4G|1|JB|A|2825
4V4G|1|JB|C|2826
4V4G|1|JB|G|2827
*
4V4G|1|JB|U|2840
4V4G|1|JB|U|2841
4V4G|1|JB|C|2842
4V4G|1|JB|A|2843
4V4G|1|JB|G|2844
4V4G|1|JB|C|2845
4V4G|1|JB|G|2846
4V4G|1|JB|G|2847
4V4G|1|JB|A|2848
4V4G|1|JB|C|2849

Current chains

Chain JB

23S RIBOSOMAL RNA

Nearby chains

Chain JE

50S ribosomal protein L3

Chain JO

50S ribosomal protein L17

Chain JQ

50S ribosomal protein L19