IL_4V4G_841

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

UACGCUAU*AAACGCGACG

Length

18 nucleotides

Bulged bases

4V4G|1|JB|A|1448, 4V4G|1|JB|C|1570, 4V4G|1|JB|A|1574, 4V4G|1|JB|C|1575

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|JB|U|1447
4V4G|1|JB|A|1448
4V4G|1|JB|C|1449
4V4G|1|JB|G|1450
4V4G|1|JB|C|1451
4V4G|1|JB|U|1452
4V4G|1|JB|A|1453
4V4G|1|JB|U|1454
*
4V4G|1|JB|A|1567
4V4G|1|JB|A|1568
4V4G|1|JB|A|1569
4V4G|1|JB|C|1570
4V4G|1|JB|G|1571
4V4G|1|JB|C|1572
4V4G|1|JB|G|1573
4V4G|1|JB|A|1574
4V4G|1|JB|C|1575
4V4G|1|JB|G|1576

Current chains

Chain JB

23S RIBOSOMAL RNA

Nearby chains

Chain JD

50S ribosomal protein L2