IL_4V4G_844
3D structure
- PDB id
- 4V4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 11.5 Å
Loop
- Sequence
- UAUAG*CGGGUA
- Length
- 11 nucleotides
- Bulged bases
- 4V4G|1|JB|G|2217
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4G_844 not in the Motif Atlas
- Geometric match to IL_4WFL_001
- Geometric discrepancy: 0.362
- The information below is about IL_4WFL_001
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
4V4G|1|JB|U|2062
4V4G|1|JB|A|2063
4V4G|1|JB|U|2064
4V4G|1|JB|A|2065
4V4G|1|JB|G|2066
*
4V4G|1|JB|C|2215
4V4G|1|JB|G|2216
4V4G|1|JB|G|2217
4V4G|1|JB|G|2218
4V4G|1|JB|U|2219
4V4G|1|JB|A|2220
Current chains
- Chain JB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain J1
- 50S ribosomal protein L31
- Chain JD
- 50S ribosomal protein L2
Coloring options: