IL_4V4Q_162
3D structure
- PDB id
- 4V4Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.46 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4Q_162 not in the Motif Atlas
- Homologous match to IL_5J7L_338
- Geometric discrepancy: 0.064
- The information below is about IL_5J7L_338
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
4V4Q|1|BB|C|2466
4V4Q|1|BB|C|2467
4V4Q|1|BB|A|2468
4V4Q|1|BB|A|2469
4V4Q|1|BB|G|2470
*
4V4Q|1|BB|C|2480
4V4Q|1|BB|G|2481
4V4Q|1|BB|A|2482
4V4Q|1|BB|C|2483
4V4Q|1|BB|G|2484
Current chains
- Chain BB
- 23S ribosomal RNA
Nearby chains
- Chain B4
- 50S ribosomal protein L36
- Chain BM
- 50S ribosomal protein L16
Coloring options: