IL_4V4Q_189

3D structure

PDB id

4V4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3.46 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

4V4Q|1|CA|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_97118.1

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

7

Unit IDs

4V4Q|1|CA|G|147
4V4Q|1|CA|G|148
4V4Q|1|CA|A|149
4V4Q|1|CA|U|150
4V4Q|1|CA|A|151
4V4Q|1|CA|A|152
4V4Q|1|CA|C|153
*
4V4Q|1|CA|G|168
4V4Q|1|CA|C|169
4V4Q|1|CA|U|170
4V4Q|1|CA|A|171
4V4Q|1|CA|A|172
4V4Q|1|CA|U|173
4V4Q|1|CA|A|174
4V4Q|1|CA|C|175

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CT

30S ribosomal protein S20