IL_4V4Q_199

3D structure

PDB id

4V4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3.46 Å

Loop

Sequence

GGAGG*CGUUAC

Length

11 nucleotides

Bulged bases

4V4Q|1|CA|U|485

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_25405.1

Basepair signature

cWW-tSH-tHW-tWW-cWW

Number of instances in this motif group

1

Unit IDs

4V4Q|1|CA|G|446
4V4Q|1|CA|G|447
4V4Q|1|CA|A|448
4V4Q|1|CA|G|449
4V4Q|1|CA|G|450
*
4V4Q|1|CA|C|483
4V4Q|1|CA|G|484
4V4Q|1|CA|U|485
4V4Q|1|CA|U|486
4V4Q|1|CA|A|487
4V4Q|1|CA|C|488

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CD

30S ribosomal protein S4

Chain CP

30S ribosomal protein S16