IL_4V4Q_200

3D structure

PDB id

4V4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3.46 Å

Loop

Sequence

GAAGG*UUGAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_64400.1

Basepair signature

cWW-L-R-R-tHW-L-cWW

Number of instances in this motif group

1

Unit IDs

4V4Q|1|CA|G|450
4V4Q|1|CA|A|451
4V4Q|1|CA|A|452
4V4Q|1|CA|G|453
4V4Q|1|CA|G|454
*
4V4Q|1|CA|U|479
4V4Q|1|CA|U|480
4V4Q|1|CA|G|481
4V4Q|1|CA|A|482
4V4Q|1|CA|C|483

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CP

30S ribosomal protein S16