3D structure

PDB id
4V4Q (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.
Experimental method
X-RAY DIFFRACTION
Resolution
3.46 Å

Loop

Sequence
GGAGUACG*UAAAAC
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_68313.1
Basepair signature
cWW-tSH-tHH-cSH-tWH-tHS-L-cWW
Number of instances in this motif group
9

Unit IDs

4V4Q|1|CA|G|887
4V4Q|1|CA|G|888
4V4Q|1|CA|A|889
4V4Q|1|CA|G|890
4V4Q|1|CA|U|891
4V4Q|1|CA|A|892
4V4Q|1|CA|C|893
4V4Q|1|CA|G|894
*
4V4Q|1|CA|U|905
4V4Q|1|CA|A|906
4V4Q|1|CA|A|907
4V4Q|1|CA|A|908
4V4Q|1|CA|A|909
4V4Q|1|CA|C|910

Current chains

Chain CA
16S ribosomal RNA

Nearby chains

Chain CL
30S ribosomal protein S12

Coloring options:

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