IL_4V4Q_232

3D structure

PDB id

4V4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3.46 Å

Loop

Sequence

CUGC*GAGGAAG

Length

11 nucleotides

Bulged bases

4V4Q|1|CA|U|1159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_53269.1

Basepair signature

cWW-tWH-R-R-R-cWW-cWW

Number of instances in this motif group

1

Unit IDs

4V4Q|1|CA|C|1158
4V4Q|1|CA|U|1159
4V4Q|1|CA|G|1160
4V4Q|1|CA|C|1161
*
4V4Q|1|CA|G|1175
4V4Q|1|CA|A|1176
4V4Q|1|CA|G|1177
4V4Q|1|CA|G|1178
4V4Q|1|CA|A|1179
4V4Q|1|CA|A|1180
4V4Q|1|CA|G|1181

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CB

30S ribosomal protein S2

Chain CI

30S ribosomal protein S9