IL_4V4Q_236

3D structure

PDB id

4V4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3.46 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85140.1

Basepair signature

cWW-cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

11

Unit IDs

4V4Q|1|CA|C|1303
4V4Q|1|CA|G|1304
4V4Q|1|CA|G|1305
4V4Q|1|CA|A|1306
4V4Q|1|CA|U|1307
4V4Q|1|CA|U|1308
*
4V4Q|1|CA|A|1329
4V4Q|1|CA|U|1330
4V4Q|1|CA|G|1331
4V4Q|1|CA|A|1332
4V4Q|1|CA|A|1333
4V4Q|1|CA|G|1334

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CM

30S ribosomal protein S13