IL_4V4R_150

3D structure

PDB id

4V4R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the whole ribosomal complex.

Experimental method

X-RAY DIFFRACTION

Resolution

5.9 Å

Loop

Sequence

UCGGACACCGAAUCC*GGAUAGGUGA

Length

25 nucleotides

Bulged bases

4V4R|1|BA|G|275, 4V4R|1|BA|A|276, 4V4R|1|BA|C|277, 4V4R|1|BA|G|281

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4R|1|BA|U|273|||E
4V4R|1|BA|C|273|||F
4V4R|1|BA|G|274
4V4R|1|BA|G|275
4V4R|1|BA|A|276
4V4R|1|BA|C|277
4V4R|1|BA|A|278
4V4R|1|BA|C|279
4V4R|1|BA|C|280
4V4R|1|BA|G|281
4V4R|1|BA|A|282
4V4R|1|BA|A|283
4V4R|1|BA|U|284
4V4R|1|BA|C|285
4V4R|1|BA|C|286
*
4V4R|1|BA|G|355
4V4R|1|BA|G|356
4V4R|1|BA|A|357
4V4R|1|BA|U|358
4V4R|1|BA|A|359
4V4R|1|BA|G|360
4V4R|1|BA|G|361
4V4R|1|BA|U|362
4V4R|1|BA|G|363
4V4R|1|BA|A|363|||A

Current chains

Chain BA

23S ribosomal RNA

Nearby chains