IL_4V4X_033
3D structure
- PDB id
- 4V4X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 5 Å
Loop
- Sequence
- GA*UAC
- Length
- 5 nucleotides
- Bulged bases
- 4V4X|1|AA|A|1394
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4X_033 not in the Motif Atlas
- Homologous match to IL_6CZR_147
- Geometric discrepancy: 0.3507
- The information below is about IL_6CZR_147
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 130
Unit IDs
4V4X|1|AA|G|922
4V4X|1|AA|A|923
*
4V4X|1|AA|U|1393
4V4X|1|AA|A|1394
4V4X|1|AA|C|1395
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AH
- 30S ribosomal protein S5
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