3D structure

PDB id
4V4X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.
Experimental method
X-RAY DIFFRACTION
Resolution
5 Å

Loop

Sequence
CGAAGACAG*UCGAG
Length
14 nucleotides
Bulged bases
4V4X|1|BA|A|1046
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V4X|1|BA|C|1043
4V4X|1|BA|G|1044
4V4X|1|BA|A|1045
4V4X|1|BA|A|1046
4V4X|1|BA|G|1047
4V4X|1|BA|A|1048
4V4X|1|BA|C|1049
4V4X|1|BA|A|1050
4V4X|1|BA|G|1051
*
4V4X|1|BA|U|1108
4V4X|1|BA|C|1109
4V4X|1|BA|G|1110
4V4X|1|BA|A|1111
4V4X|1|BA|G|1112

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BH
50S ribosomal protein L6

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.201 s