IL_4V4X_147

3D structure

PDB id

4V4X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.

Experimental method

X-RAY DIFFRACTION

Resolution

5 Å

Loop

Sequence

GGACGAAACC*GACUGACGGUAC

Length

22 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4X|1|AA|G|446
4V4X|1|AA|G|447
4V4X|1|AA|A|448
4V4X|1|AA|C|449
4V4X|1|AA|G|450
4V4X|1|AA|A|451
4V4X|1|AA|A|452
4V4X|1|AA|A|453
4V4X|1|AA|C|454
4V4X|1|AA|C|455
*
4V4X|1|AA|G|477
4V4X|1|AA|A|478
4V4X|1|AA|C|479
4V4X|1|AA|U|480
4V4X|1|AA|G|481
4V4X|1|AA|A|482
4V4X|1|AA|C|483
4V4X|1|AA|G|484
4V4X|1|AA|G|485
4V4X|1|AA|U|486
4V4X|1|AA|A|487
4V4X|1|AA|C|488

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AS

30S ribosomal protein S16