IL_4V4X_152

3D structure

PDB id

4V4X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.

Experimental method

X-RAY DIFFRACTION

Resolution

5 Å

Loop

Sequence

GGGGACG*CCAAGAAAAGCC

Length

19 nucleotides

Bulged bases

4V4X|1|BA|A|1566

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4X|1|BA|G|1423
4V4X|1|BA|G|1424
4V4X|1|BA|G|1425
4V4X|1|BA|G|1426
4V4X|1|BA|A|1427
4V4X|1|BA|C|1428
4V4X|1|BA|G|1429
*
4V4X|1|BA|C|1564
4V4X|1|BA|C|1565
4V4X|1|BA|A|1566
4V4X|1|BA|A|1567
4V4X|1|BA|G|1568
4V4X|1|BA|A|1569
4V4X|1|BA|A|1570
4V4X|1|BA|A|1571
4V4X|1|BA|A|1572
4V4X|1|BA|G|1573
4V4X|1|BA|C|1574
4V4X|1|BA|C|1575

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BD

50S ribosomal protein L2