IL_4V50_055
3D structure
- PDB id
- 4V50 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.22 Å
Loop
- Sequence
- CUGC*GAGGAAG
- Length
- 11 nucleotides
- Bulged bases
- 4V50|1|AA|U|1159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V50_055 not in the Motif Atlas
- Homologous match to IL_5J7L_053
- Geometric discrepancy: 0.2049
- The information below is about IL_5J7L_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42032.1
- Basepair signature
- cWW-cSH-cWW-tWH-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
4V50|1|AA|C|1158
4V50|1|AA|U|1159
4V50|1|AA|G|1160
4V50|1|AA|C|1161
*
4V50|1|AA|G|1175
4V50|1|AA|A|1176
4V50|1|AA|G|1177
4V50|1|AA|G|1178
4V50|1|AA|A|1179
4V50|1|AA|A|1180
4V50|1|AA|G|1181
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AB
- 30S ribosomal protein S2
- Chain AI
- 30S ribosomal protein S9
- Chain CJ
- 30S ribosomal protein S10
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