IL_4V51_026

3D structure

PDB id

4V51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GUGAAAGAC*GGGGAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V51|1|AA|G|604
4V51|1|AA|U|605
4V51|1|AA|G|606
4V51|1|AA|A|607
4V51|1|AA|A|608
4V51|1|AA|A|609
4V51|1|AA|G|610
4V51|1|AA|A|611
4V51|1|AA|C|612
*
4V51|1|AA|G|628
4V51|1|AA|G|629
4V51|1|AA|G|630
4V51|1|AA|G|631
4V51|1|AA|A|632
4V51|1|AA|G|633
4V51|1|AA|C|634

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AD

30S RIBOSOMAL PROTEIN S4

Chain AH

30S RIBOSOMAL PROTEIN S8

Chain AP

30S RIBOSOMAL PROTEIN S16

Chain AQ

30S RIBOSOMAL PROTEIN S17