IL_4V51_212

3D structure

PDB id

4V51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUACAAAG*CAAAAAGG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V51|1|CA|C|1246
4V51|1|CA|U|1247
4V51|1|CA|A|1248
4V51|1|CA|C|1249
4V51|1|CA|A|1250
4V51|1|CA|A|1251
4V51|1|CA|A|1252
4V51|1|CA|G|1253
*
4V51|1|CA|C|1284
4V51|1|CA|A|1285
4V51|1|CA|A|1286
4V51|1|CA|A|1287
4V51|1|CA|A|1288
4V51|1|CA|A|1289
4V51|1|CA|G|1290
4V51|1|CA|G|1291

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CG

30S RIBOSOMAL PROTEIN S7

Chain CI

30S RIBOSOMAL PROTEIN S9

Chain CJ

30S RIBOSOMAL PROTEIN S10

Chain CN

30S RIBOSOMAL PROTEIN S14

Chain CU

30S RIBOSOMAL PROTEIN THX