IL_4V51_246
3D structure
- PDB id
- 4V51 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GGA*UAACC
- Length
- 8 nucleotides
- Bulged bases
- 4V51|1|DA|G|776, 4V51|1|DA|A|788, 4V51|1|DA|A|789, 4V51|1|DA|C|790
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V51_246 not in the Motif Atlas
- Homologous match to IL_7RQB_023
- Geometric discrepancy: 0.0696
- The information below is about IL_7RQB_023
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.6
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
4V51|1|DA|G|775
4V51|1|DA|G|776
4V51|1|DA|A|777
*
4V51|1|DA|U|787
4V51|1|DA|A|788
4V51|1|DA|A|789
4V51|1|DA|C|790
4V51|1|DA|C|791
Current chains
- Chain DA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain D7
- 50S RIBOSOMAL PROTEIN L34
- Chain DD
- 50S RIBOSOMAL PROTEIN L2
- Chain DF
- 50S RIBOSOMAL PROTEIN L4
- Chain DW
- 50S RIBOSOMAL PROTEIN L22
Coloring options: