IL_4V51_329

3D structure

PDB id

4V51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGGGACAAC*GCUAAUCCCC

Length

19 nucleotides

Bulged bases

4V51|1|AA|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V51|1|AA|G|145
4V51|1|AA|G|146
4V51|1|AA|G|147
4V51|1|AA|G|148
4V51|1|AA|A|149
4V51|1|AA|C|150
4V51|1|AA|A|151
4V51|1|AA|A|152
4V51|1|AA|C|153
*
4V51|1|AA|G|168
4V51|1|AA|C|169
4V51|1|AA|U|170
4V51|1|AA|A|171
4V51|1|AA|A|172
4V51|1|AA|U|173
4V51|1|AA|C|174
4V51|1|AA|C|175
4V51|1|AA|C|176
4V51|1|AA|C|177

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AT

30S RIBOSOMAL PROTEIN S20