IL_4V51_335

3D structure

PDB id

4V51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGC*GGACUGCCCGCGAAAGCGGGAGGAAGGAG

Length

32 nucleotides

Bulged bases

4V51|1|AA|C|1172, 4V51|1|AA|A|1183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V51|1|AA|C|1116
4V51|1|AA|G|1117
4V51|1|AA|C|1118
*
4V51|1|AA|G|1155
4V51|1|AA|G|1156
4V51|1|AA|A|1157
4V51|1|AA|C|1158
4V51|1|AA|U|1159
4V51|1|AA|G|1160
4V51|1|AA|C|1161
4V51|1|AA|C|1162
4V51|1|AA|C|1163
4V51|1|AA|G|1164
4V51|1|AA|C|1165
4V51|1|AA|G|1166
4V51|1|AA|A|1168
4V51|1|AA|A|1169
4V51|1|AA|A|1170
4V51|1|AA|G|1171
4V51|1|AA|C|1172
4V51|1|AA|G|1173
4V51|1|AA|G|1174
4V51|1|AA|G|1175
4V51|1|AA|A|1176
4V51|1|AA|G|1177
4V51|1|AA|G|1178
4V51|1|AA|A|1179
4V51|1|AA|A|1180
4V51|1|AA|G|1181
4V51|1|AA|G|1182
4V51|1|AA|A|1183
4V51|1|AA|G|1184

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AB

30S RIBOSOMAL PROTEIN S2

Chain AG

30S RIBOSOMAL PROTEIN S7

Chain AI

30S RIBOSOMAL PROTEIN S9

Chain AJ

30S RIBOSOMAL PROTEIN S10

Chain AN

30S RIBOSOMAL PROTEIN S14