IL_4V51_352

3D structure

PDB id

4V51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGAACCCG*UGGGGUGCCCCGCGAGGGGAGCCC

Length

32 nucleotides

Bulged bases

4V51|1|CA|G|1024, 4V51|1|CA|G|1026

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V51|1|CA|G|1002
4V51|1|CA|G|1003
4V51|1|CA|A|1004
4V51|1|CA|A|1005
4V51|1|CA|C|1006
4V51|1|CA|C|1007
4V51|1|CA|C|1008
4V51|1|CA|G|1009
*
4V51|1|CA|U|1020
4V51|1|CA|G|1021
4V51|1|CA|G|1022
4V51|1|CA|G|1023
4V51|1|CA|G|1024
4V51|1|CA|U|1025
4V51|1|CA|G|1026
4V51|1|CA|C|1027
4V51|1|CA|C|1028
4V51|1|CA|C|1029
4V51|1|CA|C|1030
4V51|1|CA|G|1030|||A
4V51|1|CA|C|1030|||B
4V51|1|CA|G|1030|||C
4V51|1|CA|A|1030|||D
4V51|1|CA|G|1031
4V51|1|CA|G|1032
4V51|1|CA|G|1033
4V51|1|CA|G|1034
4V51|1|CA|A|1035
4V51|1|CA|G|1036
4V51|1|CA|C|1037
4V51|1|CA|C|1038
4V51|1|CA|C|1039

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CC

30S RIBOSOMAL PROTEIN S3