IL_4V51_353
3D structure
- PDB id
- 4V51 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- CCG*CUGG
- Length
- 7 nucleotides
- Bulged bases
- 4V51|1|CA|U|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V51_353 not in the Motif Atlas
- Homologous match to IL_4LFB_047
- Geometric discrepancy: 0.4644
- The information below is about IL_4LFB_047
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_68118.4
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 31
Unit IDs
4V51|1|CA|C|1059
4V51|1|CA|C|1060
4V51|1|CA|G|1061
*
4V51|1|CA|C|1195
4V51|1|CA|U|1196
4V51|1|CA|G|1197
4V51|1|CA|G|1198
Current chains
- Chain CA
- 16S ribosomal RNA
Nearby chains
- Chain CC
- 30S RIBOSOMAL PROTEIN S3
- Chain CE
- 30S RIBOSOMAL PROTEIN S5
- Chain CI
- 30S RIBOSOMAL PROTEIN S9
- Chain CJ
- 30S RIBOSOMAL PROTEIN S10
- Chain CN
- 30S RIBOSOMAL PROTEIN S14
- Chain CX
- MRNA
- Chain CY
- Transfer RNA; tRNA
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