IL_4V55_096
3D structure
- PDB id
- 4V55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- AAUUC*GUUAU
- Length
- 10 nucleotides
- Bulged bases
- 4V55|1|BB|U|931
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V55_096 not in the Motif Atlas
- Homologous match to IL_5J7L_399
- Geometric discrepancy: 0.3679
- The information below is about IL_5J7L_399
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_96236.1
- Basepair signature
- cWW-tWW-cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
4V55|1|BB|A|844
4V55|1|BB|A|845
4V55|1|BB|U|846
4V55|1|BB|U|847
4V55|1|BB|C|848
*
4V55|1|BB|G|930
4V55|1|BB|U|931
4V55|1|BB|U|932
4V55|1|BB|A|933
4V55|1|BB|U|934
Current chains
- Chain BB
- 23S rRNA
Nearby chains
- Chain BY
- 50S ribosomal protein L30
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