IL_4V55_303

3D structure

PDB id

4V55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

4V55|1|DB|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V55|1|DB|C|1437
4V55|1|DB|U|1438
4V55|1|DB|A|1439
4V55|1|DB|U|1440
*
4V55|1|DB|A|1551
4V55|1|DB|A|1552
4V55|1|DB|A|1553
4V55|1|DB|U|1554
4V55|1|DB|G|1555

Current chains

Chain DB

23S rRNA

Nearby chains