IL_4V57_125

3D structure

PDB id

4V57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases (A, C, G, U)

1554U

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V57|1|BB|C|1437
4V57|1|BB|U|1438
4V57|1|BB|A|1439
4V57|1|BB|U|1440
*
4V57|1|BB|A|1551
4V57|1|BB|A|1552
4V57|1|BB|A|1553
4V57|1|BB|U|1554
4V57|1|BB|G|1555

Current chains

Chain BB

23S rRNA

Nearby chains