IL_4V5C_191

3D structure

PDB id

4V5C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UGAAAGACC*GGGGGAG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5C|1|CA|U|605
4V5C|1|CA|G|606
4V5C|1|CA|A|607
4V5C|1|CA|A|608
4V5C|1|CA|A|609
4V5C|1|CA|G|610
4V5C|1|CA|A|611
4V5C|1|CA|C|612
4V5C|1|CA|C|613
*
4V5C|1|CA|G|627
4V5C|1|CA|G|628
4V5C|1|CA|G|629
4V5C|1|CA|G|630
4V5C|1|CA|G|631
4V5C|1|CA|A|632
4V5C|1|CA|G|633

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CD

30S RIBOSOMAL PROTEIN S4

Chain CH

30S RIBOSOMAL PROTEIN S8

Chain CP

30S RIBOSOMAL PROTEIN S16