IL_4V5C_204

3D structure

PDB id

4V5C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GACAUGCU*AGCAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5C|1|CA|G|993
4V5C|1|CA|A|994
4V5C|1|CA|C|995
4V5C|1|CA|A|996
4V5C|1|CA|U|997
4V5C|1|CA|G|998
4V5C|1|CA|C|999
4V5C|1|CA|U|1000
*
4V5C|1|CA|A|1041
4V5C|1|CA|G|1042
4V5C|1|CA|C|1043
4V5C|1|CA|A|1044
4V5C|1|CA|C|1045

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CN

30S RIBOSOMAL PROTEIN S14