IL_4V5E_209

3D structure

PDB id

4V5E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Insights into translational termination from the structure of RF2 bound to the ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

CUAGGGAAC*GGUGCCCCGCGAGGGGAGCCCUAG

Length

33 nucleotides

Bulged bases

4V5E|1|CA|G|1026

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5E|1|CA|C|999
4V5E|1|CA|U|1000
4V5E|1|CA|A|1001
4V5E|1|CA|G|1001|||A
4V5E|1|CA|G|1002
4V5E|1|CA|G|1003
4V5E|1|CA|A|1004
4V5E|1|CA|A|1005
4V5E|1|CA|C|1006
*
4V5E|1|CA|G|1023
4V5E|1|CA|G|1024
4V5E|1|CA|U|1025
4V5E|1|CA|G|1026
4V5E|1|CA|C|1027
4V5E|1|CA|C|1028
4V5E|1|CA|C|1029
4V5E|1|CA|C|1030
4V5E|1|CA|G|1030|||A
4V5E|1|CA|C|1030|||B
4V5E|1|CA|G|1030|||C
4V5E|1|CA|A|1030|||D
4V5E|1|CA|G|1031
4V5E|1|CA|G|1032
4V5E|1|CA|G|1033
4V5E|1|CA|G|1034
4V5E|1|CA|A|1035
4V5E|1|CA|G|1036
4V5E|1|CA|C|1037
4V5E|1|CA|C|1038
4V5E|1|CA|C|1039
4V5E|1|CA|U|1040
4V5E|1|CA|A|1041
4V5E|1|CA|G|1042

Current chains

Chain CA

16S ribosomal RNA

Nearby chains