IL_4V5E_270

3D structure

PDB id

4V5E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Insights into translational termination from the structure of RF2 bound to the ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

CGAAGACAGCC*GGUCGAG

Length

18 nucleotides

Bulged bases

4V5E|1|DA|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5E|1|DA|C|1043
4V5E|1|DA|G|1044
4V5E|1|DA|A|1045
4V5E|1|DA|A|1046
4V5E|1|DA|G|1047
4V5E|1|DA|A|1048
4V5E|1|DA|C|1049
4V5E|1|DA|A|1050
4V5E|1|DA|G|1051
4V5E|1|DA|C|1052
4V5E|1|DA|C|1053
*
4V5E|1|DA|G|1106
4V5E|1|DA|G|1107
4V5E|1|DA|U|1108
4V5E|1|DA|C|1109
4V5E|1|DA|G|1110
4V5E|1|DA|A|1111
4V5E|1|DA|G|1112

Current chains

Chain DA

23S RIBOSOMAL RNA

Nearby chains

Chain DH

50S RIBOSOMAL PROTEIN L6

Chain DJ

50S RIBOSOMAL PROTEIN L10