IL_4V5E_372

3D structure

PDB id

4V5E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Insights into translational termination from the structure of RF2 bound to the ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

UGCCGUGAGGUGUU*GCAA

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5E|1|CA|U|1073
4V5E|1|CA|G|1074
4V5E|1|CA|C|1075
4V5E|1|CA|C|1076
4V5E|1|CA|G|1077
4V5E|1|CA|U|1078
4V5E|1|CA|G|1079
4V5E|1|CA|A|1080
4V5E|1|CA|G|1081
4V5E|1|CA|G|1082
4V5E|1|CA|U|1083
4V5E|1|CA|G|1084
4V5E|1|CA|U|1085
4V5E|1|CA|U|1086
*
4V5E|1|CA|G|1099
4V5E|1|CA|C|1100
4V5E|1|CA|A|1101
4V5E|1|CA|A|1102

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CB

30S RIBOSOMAL PROTEIN S2

Chain CE

30S RIBOSOMAL PROTEIN S5