IL_4V5F_268

3D structure

PDB id

4V5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the ribosome with elongation factor G trapped in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGAAGACAGCCA*UGGUCGAG

Length

20 nucleotides

Bulged bases

4V5F|1|DA|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5F|1|DA|C|1043
4V5F|1|DA|G|1044
4V5F|1|DA|A|1045
4V5F|1|DA|A|1046
4V5F|1|DA|G|1047
4V5F|1|DA|A|1048
4V5F|1|DA|C|1049
4V5F|1|DA|A|1050
4V5F|1|DA|G|1051
4V5F|1|DA|C|1052
4V5F|1|DA|C|1053
4V5F|1|DA|A|1054
*
4V5F|1|DA|U|1105
4V5F|1|DA|G|1106
4V5F|1|DA|G|1107
4V5F|1|DA|U|1108
4V5F|1|DA|C|1109
4V5F|1|DA|G|1110
4V5F|1|DA|A|1111
4V5F|1|DA|G|1112

Current chains

Chain DA

23S RIBOSOMAL RNA

Nearby chains

Chain D9

50S RIBOSOMAL PROTEIN L36

Chain DH

50S RIBOSOMAL PROTEIN L6

Chain DJ

50S RIBOSOMAL PROTEIN L10