IL_4V5G_085
3D structure
- PDB id
- 4V5G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the 70S ribosome bound to EF-Tu and tRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GCUAAG*CGAAGC
- Length
- 12 nucleotides
- Bulged bases
- 4V5G|1|BA|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5G_085 not in the Motif Atlas
- Geometric match to IL_7RQB_107
- Geometric discrepancy: 0.228
- The information below is about IL_7RQB_107
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_49767.5
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
4V5G|1|BA|G|997
4V5G|1|BA|C|998
4V5G|1|BA|U|999
4V5G|1|BA|A|1000
4V5G|1|BA|A|1001
4V5G|1|BA|G|1002
*
4V5G|1|BA|C|1153
4V5G|1|BA|G|1154
4V5G|1|BA|A|1155
4V5G|1|BA|A|1156
4V5G|1|BA|G|1157
4V5G|1|BA|C|1158
Current chains
- Chain BA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain B3
- 50S RIBOSOMAL PROTEIN L30
- Chain BB
- 5S ribosomal RNA; 5S rRNA
- Chain BU
- 50S RIBOSOMAL PROTEIN L20
- Chain BV
- 50S RIBOSOMAL PROTEIN L21
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