IL_4V5G_246
3D structure
- PDB id
- 4V5G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the 70S ribosome bound to EF-Tu and tRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GCCAG*CUGC
- Length
- 9 nucleotides
- Bulged bases
- 4V5G|1|DA|C|995
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5G_246 not in the Motif Atlas
- Geometric match to IL_4V88_429
- Geometric discrepancy: 0.3202
- The information below is about IL_4V88_429
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_30621.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 66
Unit IDs
4V5G|1|DA|G|993
4V5G|1|DA|C|994
4V5G|1|DA|C|995
4V5G|1|DA|A|996
4V5G|1|DA|G|997
*
4V5G|1|DA|C|1158
4V5G|1|DA|U|1159
4V5G|1|DA|G|1160
4V5G|1|DA|C|1161
Current chains
- Chain DA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain D3
- 50S RIBOSOMAL PROTEIN L30
- Chain DN
- 50S RIBOSOMAL PROTEIN L13
- Chain DU
- 50S RIBOSOMAL PROTEIN L20
- Chain DV
- 50S RIBOSOMAL PROTEIN L21
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