IL_4V5G_287

3D structure

PDB id

4V5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the 70S ribosome bound to EF-Tu and tRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GACGA*UCUAUC

Length

11 nucleotides

Bulged bases

4V5G|1|DA|C|2055, 4V5G|1|DA|C|2612, 4V5G|1|DA|U|2613

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5G|1|DA|G|2053
4V5G|1|DA|A|2054
4V5G|1|DA|C|2055
4V5G|1|DA|G|2056
4V5G|1|DA|A|2057
*
4V5G|1|DA|U|2611
4V5G|1|DA|C|2612
4V5G|1|DA|U|2613
4V5G|1|DA|A|2614
4V5G|1|DA|U|2615
4V5G|1|DA|C|2616

Current chains

Chain DA

23S RIBOSOMAL RNA

Nearby chains

Chain D5

50S RIBOSOMAL PROTEIN L32

Chain DE

50S RIBOSOMAL PROTEIN L3

Chain DW

50S RIBOSOMAL PROTEIN L22