IL_4V5G_361

3D structure

PDB id

4V5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the 70S ribosome bound to EF-Tu and tRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GGGAGCCUGUGAAC*GGGAGGCGCCGGUGAAAUAC

Length

34 nucleotides

Bulged bases

4V5G|1|BA|A|2126, 4V5G|1|BA|U|2132, 4V5G|1|BA|A|2173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5G|1|BA|G|2123
4V5G|1|BA|G|2124
4V5G|1|BA|G|2125
4V5G|1|BA|A|2126
4V5G|1|BA|G|2127
4V5G|1|BA|C|2128
4V5G|1|BA|C|2129
4V5G|1|BA|U|2130
4V5G|1|BA|G|2131
4V5G|1|BA|U|2132
4V5G|1|BA|G|2133
4V5G|1|BA|A|2134
4V5G|1|BA|A|2135
4V5G|1|BA|C|2136
*
4V5G|1|BA|G|2155
4V5G|1|BA|G|2156
4V5G|1|BA|G|2157
4V5G|1|BA|A|2158
4V5G|1|BA|G|2159
4V5G|1|BA|G|2160
4V5G|1|BA|C|2161
4V5G|1|BA|G|2162
4V5G|1|BA|C|2163
4V5G|1|BA|C|2164
4V5G|1|BA|G|2165
4V5G|1|BA|G|2166
4V5G|1|BA|U|2167
4V5G|1|BA|G|2168
4V5G|1|BA|A|2169
4V5G|1|BA|A|2170
4V5G|1|BA|A|2171
4V5G|1|BA|U|2172
4V5G|1|BA|A|2173
4V5G|1|BA|C|2174

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain AW

Transfer RNA; tRNA

Chain BC

50S RIBOSOMAL PROTEIN L1