IL_4V5G_375

3D structure

PDB id

4V5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the 70S ribosome bound to EF-Tu and tRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CUUGACAUGCUAGGGAACCCGGGUGAAAGCCUGGGGUGCCCCGCGAGGGGAGCCCUAGCACAG*CUUACG

Length

69 nucleotides

Bulged bases

4V5G|1|CA|U|1212, 4V5G|1|CA|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5G|1|CA|C|990
4V5G|1|CA|U|991
4V5G|1|CA|U|992
4V5G|1|CA|G|993
4V5G|1|CA|A|994
4V5G|1|CA|C|995
4V5G|1|CA|A|996
4V5G|1|CA|U|997
4V5G|1|CA|G|998
4V5G|1|CA|C|999
4V5G|1|CA|U|1000
4V5G|1|CA|A|1001
4V5G|1|CA|G|1001|||A
4V5G|1|CA|G|1002
4V5G|1|CA|G|1003
4V5G|1|CA|A|1004
4V5G|1|CA|A|1005
4V5G|1|CA|C|1006
4V5G|1|CA|C|1007
4V5G|1|CA|C|1008
4V5G|1|CA|G|1009
4V5G|1|CA|G|1010
4V5G|1|CA|G|1011
4V5G|1|CA|U|1012
4V5G|1|CA|G|1013
4V5G|1|CA|A|1014
4V5G|1|CA|A|1015
4V5G|1|CA|A|1016
4V5G|1|CA|G|1017
4V5G|1|CA|C|1018
4V5G|1|CA|C|1019
4V5G|1|CA|U|1020
4V5G|1|CA|G|1021
4V5G|1|CA|G|1022
4V5G|1|CA|G|1023
4V5G|1|CA|G|1024
4V5G|1|CA|U|1025
4V5G|1|CA|G|1026
4V5G|1|CA|C|1027
4V5G|1|CA|C|1028
4V5G|1|CA|C|1029
4V5G|1|CA|C|1030
4V5G|1|CA|G|1030|||A
4V5G|1|CA|C|1030|||B
4V5G|1|CA|G|1030|||C
4V5G|1|CA|A|1030|||D
4V5G|1|CA|G|1031
4V5G|1|CA|G|1032
4V5G|1|CA|G|1033
4V5G|1|CA|G|1034
4V5G|1|CA|A|1035
4V5G|1|CA|G|1036
4V5G|1|CA|C|1037
4V5G|1|CA|C|1038
4V5G|1|CA|C|1039
4V5G|1|CA|U|1040
4V5G|1|CA|A|1041
4V5G|1|CA|G|1042
4V5G|1|CA|C|1043
4V5G|1|CA|A|1044
4V5G|1|CA|C|1045
4V5G|1|CA|A|1046
4V5G|1|CA|G|1047
*
4V5G|1|CA|C|1210
4V5G|1|CA|U|1211
4V5G|1|CA|U|1212
4V5G|1|CA|A|1213
4V5G|1|CA|C|1214
4V5G|1|CA|G|1215

Current chains

Chain CA

16S RIBOSOMAL RNA

Nearby chains

Chain CN

30S RIBOSOMAL PROTEIN S14 TYPE Z

Chain CS

30S RIBOSOMAL PROTEIN S19